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All results from a given calculation for C5H4N4 (purine)

using model chemistry: mPW1PW91/cc-pVTZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at mPW1PW91/cc-pVTZ
 hartrees
Energy at 0K-411.987974
Energy at 298.15K-411.995936
HF Energy-411.987974
Nuclear repulsion energy414.882134
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at mPW1PW91/cc-pVTZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3693 3542 91.92      
2 A' 3254 3122 0.39      
3 A' 3194 3064 13.30      
4 A' 3183 3053 14.06      
5 A' 1679 1610 67.30      
6 A' 1644 1577 84.28      
7 A' 1549 1485 26.65      
8 A' 1505 1444 2.35      
9 A' 1449 1390 60.90      
10 A' 1431 1372 27.43      
11 A' 1384 1327 57.75      
12 A' 1328 1274 15.93      
13 A' 1318 1264 13.02      
14 A' 1293 1240 36.20      
15 A' 1218 1168 6.96      
16 A' 1151 1104 6.69      
17 A' 1095 1051 14.89      
18 A' 954 915 1.45      
19 A' 918 881 12.42      
20 A' 817 783 14.74      
21 A' 664 637 0.41      
22 A' 573 549 3.86      
23 A' 449 431 12.29      
24 A" 1012 970 0.29      
25 A" 959 920 9.50      
26 A" 900 864 5.65      
27 A" 830 796 10.15      
28 A" 674 646 7.07      
29 A" 630 605 21.36      
30 A" 544 522 87.41      
31 A" 422 405 3.47      
32 A" 248 238 0.71      
33 A" 233 224 4.78      

Unscaled Zero Point Vibrational Energy (zpe) 21096.8 cm-1
Scaled (by 0.9592) Zero Point Vibrational Energy (zpe) 20236.0 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at mPW1PW91/cc-pVTZ
ABC
0.13971 0.05920 0.04158

See section I.F.4 to change rotational constant units
Geometric Data calculated at mPW1PW91/cc-pVTZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.805 -1.248 0.000
C2 -2.092 0.066 0.000
N3 -1.264 1.093 0.000
C4 0.000 0.699 0.000
C5 0.448 -0.623 0.000
C6 -0.536 -1.601 0.000
N7 1.824 -0.684 0.000
C8 2.173 0.568 0.000
N9 1.123 1.459 0.000
H10 -3.146 0.305 0.000
H11 -0.311 -2.661 0.000
H12 3.197 0.898 0.000
H13 1.167 2.461 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34502.40302.65492.33851.31753.67284.37273.98742.05152.05645.44374.7525
C21.34501.31922.18562.63192.28073.98714.29413.50351.08093.25705.35464.0440
N32.40301.31921.32452.42412.79133.56293.47692.41492.04073.87334.46602.7892
C42.65492.18561.32451.39512.36152.28842.17661.35583.17103.37383.20372.1133
C52.33852.63192.42411.39511.38791.37722.09542.18783.71212.17513.14203.1658
C61.31752.28072.79132.36151.38792.53213.47003.48063.23201.08324.49304.4043
N73.67283.98713.56292.28841.37722.53211.29882.25395.06762.91002.09493.2121
C84.37274.29413.47692.17662.09543.47001.29881.37695.32564.07331.07682.1437
N93.98743.50352.41491.35582.18783.48062.25391.37694.42254.36182.14891.0030
H102.05151.08092.04073.17103.71213.23205.06765.32564.42254.10276.37164.8221
H112.05643.25703.87333.37382.17511.08322.91004.07334.36184.10274.99775.3304
H125.44375.35464.46603.20373.14204.49302.09491.07682.14896.37164.99772.5621
H134.75254.04402.78922.11333.16584.40433.21212.14371.00304.82215.33042.5621

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 128.823 N1 C2 H10 115.051
N1 C6 C5 119.602 N1 C6 H11 117.540
C2 N1 C6 117.867 C2 N3 C4 111.526
N3 C2 H10 116.126 N3 C4 C5 126.072
N3 C4 N9 128.572 C4 C5 C6 116.109
C4 C5 N7 111.271 C4 N9 C8 105.589
C4 N9 H13 126.597 C5 C4 N9 105.356
C5 C6 H11 122.857 C5 N7 C8 103.038
C6 C5 N7 132.619 N7 C8 N9 114.746
N7 C8 H12 123.459 C8 N9 H13 127.813
N9 C8 H12 121.795
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at mPW1PW91/cc-pVTZ Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.196      
2 C 0.055      
3 N -0.208      
4 C 0.128      
5 C 0.014      
6 C -0.052      
7 N -0.214      
8 C 0.031      
9 N -0.056      
10 H 0.104      
11 H 0.119      
12 H 0.121      
13 H 0.154      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.199 2.942 0.000 3.673
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -49.984 6.180 0.000
y 6.180 -46.883 0.000
z 0.000 0.000 -51.449
Traceless
 xyz
x -0.818 6.180 0.000
y 6.180 3.834 0.000
z 0.000 0.000 -3.016
Polar
3z2-r2-6.032
x2-y2-3.101
xy6.180
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 15.624 1.383 0.000
y 1.383 12.248 0.000
z 0.000 0.000 5.931


<r2> (average value of r2) Å2
<r2> 251.333
(<r2>)1/2 15.853