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All results from a given calculation for C5H4N4 (purine)

using model chemistry: MP2/6-31G**

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at MP2/6-31G**
 hartrees
Energy at 0K-410.769279
Energy at 298.15K-410.777022
HF Energy-409.475010
Nuclear repulsion energy411.583493
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at MP2/6-31G**
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3729 3492 115.71      
2 A' 3328 3116 0.64      
3 A' 3272 3064 17.15      
4 A' 3257 3050 10.53      
5 A' 1675 1569 44.05      
6 A' 1642 1538 32.90      
7 A' 1533 1436 26.07      
8 A' 1515 1419 22.37      
9 A' 1465 1372 62.87      
10 A' 1446 1355 7.46      
11 A' 1411 1321 71.49      
12 A' 1362 1275 31.75      
13 A' 1344 1259 9.89      
14 A' 1300 1218 28.52      
15 A' 1220 1143 4.99      
16 A' 1136 1064 8.28      
17 A' 1117 1046 6.34      
18 A' 946 886 0.41      
19 A' 919 860 12.80      
20 A' 808 756 11.82      
21 A' 659 617 0.78      
22 A' 569 533 4.00      
23 A' 439 411 13.86      
24 A" 963 902 0.05      
25 A" 902 845 14.23      
26 A" 856 802 11.16      
27 A" 717 672 2.60      
28 A" 661 619 0.36      
29 A" 609 570 51.38      
30 A" 506 474 93.57      
31 A" 407 381 0.98      
32 A" 238 223 0.47      
33 A" 224 210 3.24      

Unscaled Zero Point Vibrational Energy (zpe) 21087.3 cm-1
Scaled (by 0.9365) Zero Point Vibrational Energy (zpe) 19748.3 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at MP2/6-31G**
ABC
0.13675 0.05848 0.04096

See section I.F.4 to change rotational constant units
Geometric Data calculated at MP2/6-31G**

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.814 -1.265 0.000
C2 -2.107 0.063 0.000
N3 -1.276 1.105 0.000
C4 0.000 0.706 0.000
C5 0.455 -0.626 0.000
C6 -0.531 -1.616 0.000
N7 1.836 -0.694 0.000
C8 2.180 0.579 0.000
N9 1.127 1.473 0.000
H10 -3.161 0.297 0.000
H11 -0.300 -2.674 0.000
H12 3.202 0.917 0.000
H13 1.167 2.481 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35972.43062.67902.35791.33023.69484.39964.01822.06272.06895.47034.7871
C21.35971.33312.20292.65322.30264.01504.31813.52781.08013.27995.37714.0697
N32.43061.33311.33692.44832.82163.59463.49602.43072.05123.90364.48172.8033
C42.67902.20291.33691.40772.38252.30902.18391.36293.18763.39373.20882.1236
C52.35792.65322.44831.40771.39811.38242.10402.20363.73252.18313.15033.1868
C61.33022.30262.82162.38251.39812.54093.48893.50623.25241.08304.51174.4349
N73.69484.01503.59462.30901.38242.54091.31852.27995.09472.91272.11203.2441
C84.39964.31813.49602.18392.10403.48891.31851.38165.34894.09071.07622.1546
N94.01823.52782.43071.36292.20363.50622.27991.38164.44634.38562.14821.0084
H102.06271.08012.05123.18763.73253.25245.09475.34894.44634.12546.39324.8475
H112.06893.27993.90363.39372.18311.08302.91274.09074.38564.12545.01585.3593
H125.47035.37714.48173.20883.15034.51172.11201.07622.14826.39325.01582.5662
H134.78714.06972.80332.12363.18684.43493.24412.15461.00844.84755.35932.5662

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.012 N1 C2 H10 114.963
N1 C6 C5 119.573 N1 C6 H11 117.671
C2 N1 C6 117.743 C2 N3 C4 111.191
N3 C2 H10 116.025 N3 C4 C5 126.243
N3 C4 N9 128.396 C4 C5 C6 116.238
C4 C5 N7 111.691 C4 N9 C8 105.449
C4 N9 H13 126.511 C5 C4 N9 105.361
C5 C6 H11 122.757 C5 N7 C8 102.310
C6 C5 N7 132.071 N7 C8 N9 115.189
N7 C8 H12 123.439 C8 N9 H13 128.040
N9 C8 H12 121.372
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability