return to home page Computational Chemistry Comparison and Benchmark DataBase Release 22 (May 2022) Standard Reference Database 101 National Institute of Standards and Technology
You are here: Calculated > Energy > Optimized > Energy

All results from a given calculation for C5H4N4 (purine)

using model chemistry: HSEh1PBE/6-31G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at HSEh1PBE/6-31G*
 hartrees
Energy at 0K-411.522350
Energy at 298.15K-411.530228
HF Energy-411.522350
Nuclear repulsion energy413.470683
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at HSEh1PBE/6-31G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3689 3509 90.79      
2 A' 3287 3126 1.14      
3 A' 3224 3066 19.07      
4 A' 3212 3055 16.06      
5 A' 1696 1613 66.67      
6 A' 1655 1574 80.49      
7 A' 1565 1488 29.56      
8 A' 1517 1443 3.93      
9 A' 1462 1391 65.46      
10 A' 1445 1374 20.23      
11 A' 1395 1327 65.73      
12 A' 1345 1279 16.22      
13 A' 1338 1272 14.13      
14 A' 1305 1241 30.74      
15 A' 1224 1164 7.18      
16 A' 1157 1100 6.14      
17 A' 1108 1054 13.32      
18 A' 954 907 1.43      
19 A' 920 875 12.15      
20 A' 819 779 14.71      
21 A' 664 631 0.45      
22 A' 573 545 4.04      
23 A' 448 426 12.80      
24 A" 999 950 0.44      
25 A" 946 900 9.04      
26 A" 885 842 5.51      
27 A" 815 775 9.40      
28 A" 672 639 5.97      
29 A" 628 597 26.28      
30 A" 540 514 114.57      
31 A" 420 400 3.27      
32 A" 249 237 0.29      
33 A" 232 221 4.45      

Unscaled Zero Point Vibrational Energy (zpe) 21193.3 cm-1
Scaled (by 0.951) Zero Point Vibrational Energy (zpe) 20154.8 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at HSEh1PBE/6-31G*
ABC
0.13856 0.05886 0.04131

See section I.F.4 to change rotational constant units
Geometric Data calculated at HSEh1PBE/6-31G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.812 -1.250 0.000
C2 -2.096 0.068 0.000
N3 -1.267 1.100 0.000
C4 0.000 0.702 0.000
C5 0.452 -0.624 0.000
C6 -0.539 -1.605 0.000
N7 1.829 -0.689 0.000
C8 2.176 0.566 0.000
N9 1.126 1.461 0.000
H10 -3.153 0.308 0.000
H11 -0.314 -2.668 0.000
H12 3.203 0.899 0.000
H13 1.170 2.469 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.34852.41272.66412.34901.32203.68454.38243.99822.05592.06305.45694.7668
C21.34851.32372.18972.64002.28533.99744.30073.50991.08433.26535.36404.0528
N32.41271.32371.32752.43432.80083.57563.48362.41952.04613.88664.47452.7944
C42.66412.18971.32751.40162.36912.29842.18021.35773.17783.38503.20942.1184
C52.34902.64002.43431.40161.39351.37902.09532.19203.72372.18233.14533.1752
C61.32202.28532.80082.36911.39352.53873.47593.48883.23951.08694.50264.4170
N73.68453.99743.57562.29841.37902.53871.30242.26285.08132.91682.10043.2260
C84.38244.30073.48362.18022.09533.47591.30241.38005.33544.08151.08012.1522
N93.99823.50992.41951.35772.19203.48882.26281.38004.43164.37322.15241.0081
H102.05591.08432.04613.17783.72373.23955.08135.33544.43164.11356.38404.8327
H112.06303.26533.88663.38502.18231.08692.91684.08154.37324.11355.00965.3465
H125.45695.36404.47453.20943.14534.50262.10041.08012.15246.38405.00962.5689
H134.76684.05282.79442.11843.17524.41703.22602.15221.00814.83275.34652.5689

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.076 N1 C2 H10 114.928
N1 C6 C5 119.747 N1 C6 H11 117.496
C2 N1 C6 117.686 C2 N3 C4 111.363
N3 C2 H10 115.996 N3 C4 C5 126.229
N3 C4 N9 128.583 C4 C5 C6 115.900
C4 C5 N7 111.500 C4 N9 C8 105.560
C4 N9 H13 126.488 C5 C4 N9 105.188
C5 C6 H11 122.757 C5 N7 C8 102.743
C6 C5 N7 132.600 N7 C8 N9 115.008
N7 C8 H12 123.403 C8 N9 H13 127.951
N9 C8 H12 121.589
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at HSEh1PBE/6-31G* Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 N -0.424      
2 C 0.145      
3 N -0.484      
4 C 0.539      
5 C 0.188      
6 C 0.029      
7 N -0.496      
8 C 0.224      
9 N -0.683      
10 H 0.186      
11 H 0.197      
12 H 0.206      
13 H 0.372      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  2.221 2.992 0.000 3.726
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å
Primitive
 xyz
x -49.576 6.190 0.000
y 6.190 -46.383 0.000
z 0.000 0.000 -51.247
Traceless
 xyz
x -0.761 6.190 0.000
y 6.190 4.029 0.000
z 0.000 0.000 -3.268
Polar
3z2-r2-6.536
x2-y2-3.193
xy6.190
xz0.000
yz0.000


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 14.554 1.333 0.000
y 1.333 11.287 0.000
z 0.000 0.000 4.213


<r2> (average value of r2) Å2
<r2> 252.536
(<r2>)1/2 15.891