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All results from a given calculation for C5H4N4 (purine)

using model chemistry: CCD/6-311G*

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes CS 1A
Energy calculated at CCD/6-311G*
 hartrees
Energy at 0K-410.876426
Energy at 298.15K-410.884303
HF Energy-409.548714
Nuclear repulsion energy412.504208
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at CCD/6-311G*
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3724 3557 94.16      
2 A' 3261 3115 1.41      
3 A' 3213 3069 16.80      
4 A' 3197 3053 11.84      
5 A' 1707 1630 60.57      
6 A' 1673 1598 73.03      
7 A' 1574 1503 29.22      
8 A' 1532 1463 18.23      
9 A' 1468 1402 98.48      
10 A' 1460 1395 8.07      
11 A' 1397 1334 59.19      
12 A' 1342 1281 13.00      
13 A' 1317 1258 4.43      
14 A' 1243 1187 55.25      
15 A' 1230 1175 3.97      
16 A' 1150 1098 8.87      
17 A' 1116 1066 16.15      
18 A' 963 919 0.17      
19 A' 932 890 14.84      
20 A' 818 781 13.52      
21 A' 668 638 0.28      
22 A' 577 551 3.21      
23 A' 446 426 14.04      
24 A" 994 950 0.15      
25 A" 938 896 14.22      
26 A" 889 849 9.95      
27 A" 796 760 7.00      
28 A" 671 641 5.64      
29 A" 623 595 28.11      
30 A" 495 473 110.11      
31 A" 423 404 12.28      
32 A" 248 237 0.12      
33 A" 233 222 6.11      

Unscaled Zero Point Vibrational Energy (zpe) 21157.7 cm-1
Scaled (by 0.9551) Zero Point Vibrational Energy (zpe) 20207.7 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at CCD/6-311G*
ABC
0.13796 0.05856 0.04111

See section I.F.4 to change rotational constant units
Geometric Data calculated at CCD/6-311G*

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
N1 -1.813 -1.260 0.000
C2 -2.100 0.065 0.000
N3 -1.273 1.100 0.000
C4 0.000 0.703 0.000
C5 0.452 -0.621 0.000
C6 -0.538 -1.610 0.000
N7 1.837 -0.687 0.000
C8 2.179 0.572 0.000
N9 1.126 1.468 0.000
H10 -3.159 0.302 0.000
H11 -0.310 -2.674 0.000
H12 3.208 0.906 0.000
H13 1.166 2.473 0.000

Atom - Atom Distances (Å)
  N1 C2 N3 C4 C5 C6 N7 C8 N9 H10 H11 H12 H13
N11.35542.42082.67272.35401.32293.69454.39254.00992.06202.06385.46824.7762
C21.35541.32532.19552.64332.29074.00814.30943.51821.08503.27195.37444.0586
N32.42081.32531.33292.43642.80773.58613.49182.42652.04803.89434.48472.7991
C42.67272.19551.33291.39952.37522.30372.18301.36073.18453.39133.21412.1192
C52.35402.64332.43641.39951.39941.38582.09862.19473.72762.18963.15003.1751
C61.32292.29072.80772.37521.39942.54713.48433.49863.24491.08774.51184.4242
N73.69454.00813.58612.30371.38582.54711.30482.26935.09272.92442.10183.2303
C84.39254.30943.49182.18302.09863.48431.30481.38285.34494.08991.08162.1538
N94.00993.51822.42651.36072.19473.49862.26931.38284.44064.38322.15661.0058
H102.06201.08502.04803.18453.72763.24495.09275.34494.44064.12016.39544.8396
H112.06383.27193.89433.39132.18961.08772.92444.08994.38324.12015.01835.3540
H125.46825.37444.48473.21413.15004.51182.10181.08162.15666.39545.01832.5735
H134.77624.05862.79912.11923.17514.42423.23032.15381.00584.83965.35402.5735

picture of purine state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
N1 C2 N3 129.116 N1 C2 H10 114.883
N1 C6 C5 119.678 N1 C6 H11 117.437
C2 N1 C6 117.578 C2 N3 C4 111.360
N3 C2 H10 116.000 N3 C4 C5 126.148
N3 C4 N9 128.534 C4 C5 C6 116.121
C4 C5 N7 111.599 C4 N9 C8 105.437
C4 N9 H13 126.493 C5 C4 N9 105.318
C5 C6 H11 122.886 C5 N7 C8 102.476
C6 C5 N7 132.280 N7 C8 N9 115.170
N7 C8 H12 123.194 C8 N9 H13 128.070
N9 C8 H12 121.636
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability