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All results from a given calculation for C5H12S (1-Pentanethiol)

using model chemistry: TPSSh/cc-pVTZ

19 10 17 12 22

States and conformations

State Conformation minimum conformation conformer description state description
1 1 yes C1 1A'
Energy calculated at TPSSh/cc-pVTZ
 hartrees
Energy at 0K-596.077409
Energy at 298.15K-596.090058
HF Energy-596.077409
Nuclear repulsion energy286.930647
The energy at 298.15K was derived from the energy at 0K and an integrated heat capacity that used the calculated vibrational frequencies.
Vibrational Frequencies calculated at TPSSh/cc-pVTZ
Mode Number Symmetry Frequency
(cm-1)
Scaled Frequency
(cm-1)
IR Intensities
(km mol-1)
Raman Act
4/u)
Dep P Dep U
1 A' 3087 2989 44.17      
2 A' 3047 2950 38.54      
3 A' 3020 2924 62.42      
4 A' 3019 2923 18.61      
5 A' 3011 2915 17.51      
6 A' 2999 2904 6.89      
7 A' 2683 2598 7.27      
8 A' 1522 1473 6.01      
9 A' 1512 1464 0.15      
10 A' 1500 1453 0.90      
11 A' 1495 1448 1.30      
12 A' 1492 1445 0.85      
13 A' 1422 1376 1.33      
14 A' 1395 1351 0.20      
15 A' 1370 1326 7.88      
16 A' 1304 1263 5.29      
17 A' 1238 1199 21.35      
18 A' 1135 1099 2.61      
19 A' 1062 1029 0.21      
20 A' 1052 1019 0.69      
21 A' 1019 987 0.15      
22 A' 902 873 0.50      
23 A' 853 826 0.73      
24 A' 730 707 4.70      
25 A' 422 409 1.26      
26 A' 336 326 0.21      
27 A' 238 230 1.11      
28 A' 111 107 1.01      
29 A" 3099 3001 31.74      
30 A" 3083 2985 65.86      
31 A" 3058 2961 32.63      
32 A" 3041 2945 5.03      
33 A" 3020 2924 1.02      
34 A" 1512 1464 6.12      
35 A" 1334 1292 0.32      
36 A" 1329 1287 0.50      
37 A" 1286 1245 0.16      
38 A" 1224 1185 0.21      
39 A" 1072 1038 1.64      
40 A" 957 927 0.04      
41 A" 834 808 1.09      
42 A" 752 728 0.05      
43 A" 727 704 3.77      
44 A" 246 238 0.00      
45 A" 150 145 1.01      
46 A" 136 131 5.37      
47 A" 74 72 3.96      
48 A" 60 59 7.74      

Unscaled Zero Point Vibrational Energy (zpe) 34984.8 cm-1
Scaled (by 0.9683) Zero Point Vibrational Energy (zpe) 33875.8 cm-1
See section III.C.1 List or set vibrational scaling factors to change the scale factors used here.
See section III.C.2 Calculate a vibrational scaling factor for a given set of molecules to determine the least squares best scaling factor.
Rotational Constants (cm-1) from geometry optimized at TPSSh/cc-pVTZ
ABC
0.47645 0.02663 0.02582

See section I.F.4 to change rotational constant units
Geometric Data calculated at TPSSh/cc-pVTZ

Point Group is Cs

Cartesians (Å)
Atom x (Å) y (Å) z (Å)
S1 -2.418 1.667 0.000
H2 -3.655 1.141 0.000
C3 -1.500 0.078 0.000
H4 -1.779 -0.493 0.887
H5 -1.779 -0.493 -0.887
C6 0.000 0.361 0.000
H7 0.255 0.962 -0.879
H8 0.255 0.962 0.879
C9 0.827 -0.928 0.000
H10 0.565 -1.529 0.878
H11 0.565 -1.529 -0.878
C12 2.336 -0.668 0.000
H13 2.598 -0.067 0.877
H14 2.598 -0.067 -0.877
C15 3.161 -1.957 0.000
H16 2.942 -2.563 0.883
H17 2.942 -2.563 -0.883
H18 4.232 -1.741 0.000

Atom - Atom Distances (Å)
  S1 H2 C3 H4 H5 C6 H7 H8 C9 H10 H11 C12 H13 H14 C15 H16 H17 H18
S11.34491.83472.42062.42062.74762.90002.90004.15484.45854.45855.29655.37855.37856.65226.88476.88477.4720
H21.34492.40292.64132.64133.73764.01164.01164.93715.07035.07036.25896.42896.42897.48737.61757.61758.3974
C31.83472.40291.09091.09091.52702.15282.15282.53582.76002.76003.90864.19364.19365.08625.24325.24326.0141
H42.42062.64131.09091.77372.16373.06112.50082.78732.56263.11134.21354.39774.73815.22835.15525.45046.2030
H52.42062.64131.09091.77372.16372.50083.06112.78733.11132.56264.21354.73814.39775.22835.45045.15526.2030
C62.74763.73761.52702.16372.16371.09441.09441.53172.15942.15942.55312.77502.77503.91984.24124.24124.7254
H72.90004.01162.15283.06112.50081.09441.75712.16143.06382.51062.78633.10312.55914.21174.76994.43284.8885
H82.90004.01162.15282.50083.06111.09441.75712.16142.51063.06382.78632.55913.10314.21174.43284.76994.8885
C94.15484.93712.53582.78732.78731.53172.16142.16141.09591.09591.53112.15522.15522.55052.81532.81533.5004
H104.45855.07032.76002.56263.11132.15943.06382.51061.09591.75532.15652.50473.05792.77402.59273.13383.7769
H114.45855.07032.76003.11132.56262.15942.51063.06381.09591.75532.15653.05792.50472.77403.13382.59273.7769
C125.29656.25893.90864.21354.21352.55312.78632.78631.53112.15652.15651.09501.09501.52972.17642.17642.1782
H135.37856.42894.19364.39774.73812.77503.10312.55912.15522.50473.05791.09501.75312.15822.52023.07352.4985
H145.37856.42894.19364.73814.39772.77502.55913.10312.15523.05792.50471.09501.75312.15823.07352.52022.4985
C156.65227.48735.08625.22835.22833.91984.21174.21172.55052.77402.77401.52972.15822.15821.09321.09321.0923
H166.88477.61755.24325.15525.45044.24124.76994.43282.81532.59273.13382.17642.52023.07351.09321.76551.7660
H176.88477.61755.24325.45045.15524.24124.43284.76992.81533.13382.59272.17643.07352.52021.09321.76551.7660
H187.47208.39746.01416.20306.20304.72544.88854.88853.50043.77693.77692.17822.49852.49851.09231.76601.7660

picture of 1-Pentanethiol state 1 conformation 1
More geometry information
Calculated Bond Angles
atom1 atom2 atom3 angle atom1 atom2 atom3 angle
S1 C3 H4 108.997 S1 C3 H5 108.997
S1 C3 C6 109.298 H2 S1 C3 96.973
C3 C6 H7 109.303 C3 C6 H8 109.303
C3 C6 C9 111.997 H4 C3 H5 108.776
H4 C3 C6 110.371 H5 C3 C6 110.371
C6 C9 H10 109.410 C6 C9 H11 109.410
C6 C9 C12 112.936 H7 C6 H8 106.787
H7 C6 C9 109.655 H8 C6 C9 109.655
C9 C12 H13 109.185 C9 C12 H14 109.185
C9 C12 C15 112.876 H10 C9 H11 106.422
H10 C9 C12 109.227 H11 C9 C12 109.227
C12 C15 H16 111.054 C12 C15 H17 111.054
C12 C15 H18 111.253 H13 C12 H14 106.364
H13 C12 C15 109.510 H14 C12 C15 109.510
H16 C15 H17 107.700 H16 C15 H18 107.810
H17 C15 H18 107.810
Electronic energy levels
Charges, Dipole, Quadrupole and Polarizability
Charges from optimized geometry at TPSSh/cc-pVTZ Charges (e)
Number Element Mulliken CHELPG AIM ESP
1 S -0.180      
2 H 0.071      
3 C -0.111      
4 H 0.085      
5 H 0.085      
6 C -0.108      
7 H 0.073      
8 H 0.073      
9 C -0.098      
10 H 0.055      
11 H 0.055      
12 C -0.101      
13 H 0.060      
14 H 0.060      
15 C -0.229      
16 H 0.068      
17 H 0.068      
18 H 0.076      


Electric dipole moments
Electric dipole components in Debye
(What's a Debye? See section VII.A.3)
  x y z Total
  0.439 -1.670 0.000 1.727
CHELPG        
AIM        
ESP        


Electric Quadrupole moment
Quadrupole components in D Å


Polarizabilities
Components of the polarizability tensor.
Units are Å3 (Angstrom cubed)
Change units.
  x y z
x 14.528 -2.296 0.000
y -2.296 12.269 0.000
z 0.000 0.000 9.602


<r2> (average value of r2) Å2
<r2> 411.918
(<r2>)1/2 20.296